I bought the engine I have with the understanding that it is an L98, with the engine number you saw can you tell?
From my research into the subject so far (the accuracy of which I make no guarantees about whatsoever BTW), all Holden & HSV LS1 V8's up until the end of 2005 had a "VF" engine number prefix regardless of what they were fitted to.
From January 2006 they started using the RPO codes to prefix Gen IV engine numbers (from the VE factory service manual)...
The first Gen IV V8s fitted to mid-VZ Commodores onward were L76 engines, basically an LS2 bottom end, with the heads off an L92 truck engine and with the DoD/AFM hardware (except it wasn't activated in the ECU). These motors were prefixed with engine numbers "6MA" for manual trans or "6MB" for auto trans, the VZ Series II ran from January 2006 to July 2006 when the VE sedan was released.
From the start of VE all V8 engines were the L98 with a "7NC" prefix for manual trans or "7ND" for auto, the L98 is just an L76 with all the DoD/AFM hardware removed (being lifters, high volume oil pump and relief valve, as well as the valley cover with the solenoid assy attached (see below)).
Also with the delayed release of station wagons and utes, GMH continued to manufacture VZ wagons and utes but with the L98 engine same as the VE, both wagons and utes had different prefixes again but I haven't quite nailed them down yet, I know a manual L98 VZ ute is "CAK" and an auto L98 VZ wagon is "7NB" but I'm having trouble finding info. These ran until the release of their respective VE ugrades in August 2007 for utes and July 2008 for wagons.
From April 7th 2009 Holden started refitting the L76 engine to auto vehicles only (while manual trans vehicles still got the L98) until the release of the VE Series II in September 2010 when all V8 vehicles (auto and manual) were fitted with the new L77, all of which had different engine number prefixes again. The L77 is just an L76 with some added hardware to allow it to run on Ethanol fuels (valves and seats, injectors, extra sensors and an ECU tune) except now the DoD/AFM was actually active in auto vehicles only (manual vehicles still had the hardware, it was just switched off).
All HSV vehicles from the same period had different prefixes yet again, so you can see it's a very specific system, you can match the engine number exactly with the vehicle and transmission it came from (providing your list is complete and accurate of course).
Also (and I probably should have led with this), if you refer to the picture above, your number being 6MB05305**** means it was manufactured on the 305th day of 2005 (or November 1st 2005 if google is any good) for the upcoming VZ Series II
L98 motors didn't start getting produced until six or seven months after your motor in the leadup to the VE.
Long story short (yeah I know, too late for that), I'm 99% sure your motor is an L76, but they're more or less an L98 anyway, it's just that SRE (hopefully) removed all the DoD/AFM hardware instead of Holden.
DoD/AFM motors have 8 standard lifters and 8 collapsible lifters...
Difference between AFM and normal LS lifters.jpg 114.25K
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...on cylinders 1, 4, 6 and 7, the problem is that these collapsible lifters are barely good enough for a standard engine and crap-out under any extra valve lift, valve spring tension or extended high RPM.
These lifters are deactivated hydraulically using engine oil pressure by 4 electric solenoids (which BTW are renowned for developing leaks) mounted under a specific valley cover...
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...which has a labyrinth of oil passages moulded into it...
How to Identify a DOD Engine.jpg 201.92K
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...whereas an LS2 / L98 valley cover has the oil passages blocked off from underneath...
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...and smooth on top...
LS2valleycover1.jpg 58.56K
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You can tell an LS2 / L98 (smooth) cover by the PCV tube sticking out the front (which yours has). BTW, you may have noticed from the above that your engine still has the L76 rocker covers on it too, the L98 covers don't have PCV tubes at all so you will either need to block them off, which probably isn't a good idea on a race car engine, or connect them all into the PCV solenoid on the front of the RH cylinder head.
Anyway, I could literally sit here typing about LS engines all day but things to do and all that...